ADVANCED INTERACTION SEARCH
Grape ripe rot (Colletotrichum viniferum) causes huge losses in grape production in vineyards in southern China. However, the molecular mechanism against ripe rot in grape species and the responsive genes implicated in these processes are relatively unknown. Here, we present the transcriptome analysis of berries from a C. viniferum-resistant species (Vitis davidii Föex). Uninfected berries at day zero were used as control samples (CK), an inoculation was made at day zero, and the berries were subsequently analyzed at 1 day, 3 days, and 7 days post inoculation (dpi), which exhibited a sequential disease-progression stage. There were a total of 1810 differentially expressed genes, including 1315 up-regulated and 495 down-regulated transcripts. At 7 dpi, these differentially expressed genes (DEGs) were predominantly enriched in berries. In addition, in C. viniferum-infected grape fruits at 7 dpi, considerable changes in gene expression were induced, and those up-regulated genes involved in MAPK cascade, calcium ion binding, and serine/threonine kinase activity were enriched. According to our KEGG pathway analysis, numerous enriched biological processes, such as plant–pathogen interaction, phenylpropanoid biosynthesis, and metabolism, were implicated in grape–fungus interactions. Our research also revealed alterations in the expression pattern of phenylalanine-pathway-related transcription factors (TFs) and genes. We proposed a model in which C. viniferum invasion produces intracellular and extracellular Ca2+ deregulation to stimulate the MAPK pathway to activate TFs’ (WRKY, ERF, and MYB) up-regulation, thus initiating disease-resistant responses in the tolerant Vitis species. Our results offer comprehensive transcriptomic data about molecular responses in C. viniferum-infected grape, and these data will aid in understanding of processes underlying plant responses to C. viniferum.
Link to paper-
Partially indexed reference.
Date: 19th April 2020
Synth:Growth stage:VS 4 Flowering:VS 4c Bud development:VS 4c.2 Differentiation of main axis of anlage into inflorescence rachis primordium or tendril primordium
The development of inflorescence primordia (IP) is clearly described i...Read more
Date: 16th February 2020
Synth:Guides:Data standards:Colour codes
I think it would be very useful if we have standard colour codes for e...Read more
Date: 29th October 2015
Reference:Journal:Weed Technology:2015:Online October 2015:Devkota P 2015:Influence of Spray Solution Temperature and Holding Duration on Weed Control with Premixed Glyphosate and Dicamba Formulation
Pesticides in general are chemical products, therefore the quality of ...Read more
List of sponsors.. Read more